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RNASeq Spring 2015
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RNA-Seq Analysis
Instructors: Kelly Street and Marla Johnson
March 11, 2015
List of requirments:
R
(version >= 2.15)
Bioconductor
(version >= 2.11)
edgeR
package
Yeast RNA-Seq data from Risso et al. (2011) [
fastq
] [
R package
] [
gene-level read counts
]
Galaxy Quality Control, Mapping and Gene-level Summaries
Normalization and Differential Expression using edgeR
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RNA-Seq Analysis
Instructors: Kelly Street and Marla Johnson
March 11, 2015
List of requirments:
Galaxy Quality Control, Mapping and Gene-level Summaries
Normalization and Differential Expression using edgeR