Workshop Presentation


Copy files from CGRL to your local computer by running scp, for example:
scp -Crp <CGRL_LOGIN>@poset.cgrl.berkeley.edu:/global/courses/chipseqworkshop/ChIP-seq-analysis.pdf .

My saved UCSC session, if you want to compare. It contains four ChIP experiments (DNase I x 2, ER, FoxA1) with MACS- and Grizzly-called peaks.

Tools mentioned in class: Sole-Search | CPP

Questions? Comments? Contact Tommy Kaplan at tomkap@berkeley.edu