RNASeq+Spring+2015

= RNA-Seq Analysis =

March 11, 2015
List of requirments:
 * __[|R]__ (version >= 2.15)
 * __[|Bioconductor]__ (version >= 2.11)
 * [|edgeR] package
 * Yeast RNA-Seq data from Risso et al. (2011) [[|fastq]] [[|R package]] [ [[file:cgrlucb/geneLevelCounts.rda|gene-level read counts]] ]

Galaxy Quality Control, Mapping and Gene-level Summaries

Normalization and Differential Expression using edgeR